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eif5a protein (Methanococcus voltae) - STRING interaction network
"eif5a" - Translation initiation factor 5A in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
eif5aTranslation initiation factor 5A; Functions by promoting the formation of the first peptide bond (132 aa)    
Predicted Functional Partners:
rps5
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (221 aa)
 
 
  0.999
rpl15e
PFAM- Ribosomal protein L15e; KEGG- hypothetical protein LOC100263573; Belongs to the eukaryotic ribosomal protein eL15 family (194 aa)
 
 
  0.999
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
 
 
  0.996
rpl6
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (182 aa)
 
 
  0.996
rpl5
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (181 aa)
 
 
  0.996
rps4
30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit (177 aa)
 
 
  0.994
rps13
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (149 aa)
 
 
  0.994
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (143 aa)
 
 
  0.992
Mvol_1194
PFAM- CoA-binding domain protein; KEGG- dat-HRM2_16770 SucD3 (707 aa)
       
      0.992
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
     
 
  0.991
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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