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STRINGSTRING
Mvol_0347 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0347" - PFAM: transcriptional regulator TrmB in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_0347PFAM- transcriptional regulator TrmB; KEGG- hypothetical protein (222 aa)    
Predicted Functional Partners:
Mvol_0915
KEGG- hypothetical protein (201 aa)
   
          0.598
Mvol_0898
PFAM- Protein of unknown function UPF0058 (118 aa)
   
          0.597
pfdA
Prefoldin subunit alpha; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding (149 aa)
   
          0.586
Mvol_0956
PFAM- CheC domain protein; KEGG- gem-GM21_0635 CheC, inhibitor of MCP methylation (205 aa)
   
          0.565
Mvol_0033
PFAM- Protein of unknown function UPF0058 (98 aa)
   
          0.563
ADI35693.1
PFAM- Protein of unknown function UPF0058 (98 aa)
   
          0.563
Mvol_0955
KEGG- gme-Gmet_3210 CheC, inhibitor of MCP methylation (239 aa)
   
          0.554
Mvol_1640
PFAM- protein of unknown function DUF1611; KEGG- ppr-PBPRB1849 hypothetical protein (348 aa)
   
          0.549
Mvol_1013
PFAM- nucleic acid binding OB-fold tRNA/helicase-type; KEGG- hypothetical protein; K07466 replication factor A1 (643 aa)
   
          0.530
Mvol_1161
KEGG- hypothetical protein; PFAM- PUA domain containing protein; SMART- PUA domain containing protein (636 aa)
   
          0.523
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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