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Mvol_0420 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0420" - PFAM: elongation factor Tu domain 2 protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_0420PFAM- elongation factor Tu domain 2 protein; KEGG- cco-CCC13826_0756 selenocysteine-specific translation elongation factor (310 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
     
 
  0.816
Mvol_1320
PFAM- translation initiation factor 2, alpha subunit; RNA binding S1 domain protein; KEGG- SUI2; Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP;-TRUNCATED- (263 aa)
     
 
  0.812
rps2
30S ribosomal protein S2; KEGG- hypothetical protein; K02998 small subunit ribosomal protein SAe; TIGRFAM- ribosomal protein S2; PFAM- ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family (218 aa)
 
 
  0.811
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (333 aa)
   
 
  0.761
rps28e
PFAM- Ribosomal protein S28e; KEGG- Ribosomal protein S28e containing protein; K02979 small subunit ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family (76 aa)
 
      0.752
rps6e
PFAM- Ribosomal protein S6e; KEGG- 40S ribosomal protein S6; K02991 small subunit ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family (124 aa)
   
      0.743
eif2b
Translation initiation factor 2 subunit beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA (140 aa)
     
 
  0.739
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
     
 
  0.736
rpl7ae
50S ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C’/D’ sRNAs (117 aa)
   
 
  0.733
rps9
30S ribosomal protein S9; KEGG- hypothetical protein; K02960 small subunit ribosomal protein S16e; TIGRFAM- ribosomal protein S9P; PFAM- ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family (134 aa)
     
 
  0.721
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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