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Mvol_0544 protein (Methanococcus voltae) - STRING interaction network
"Mvol_0544" - TPR repeat-containing protein in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mvol_0544TPR repeat-containing protein; KEGG- hhe-HH1443 putative endonuclease; PFAM- TPR repeat-containing protein; ATPase associated with various cellular activities AAA_5; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide repeat (890 aa)    
Predicted Functional Partners:
Mvol_0545
PFAM- 5-methylcytosine restriction system component-like protein; KEGG- cjr-CJE0135 hypothetical protein (432 aa)
 
   
  0.985
Mvol_1027
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (888 aa)
   
 
  0.963
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (387 aa)
   
 
  0.963
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (327 aa)
   
   
  0.957
smc
Chromosome partition protein Smc; Required for chromosome condensation and partitioning; Belongs to the SMC family (1199 aa)
   
 
  0.936
Mvol_1467
KEGG- sat-SYN_01979 anaerobic ribonucleoside-triphosphate reductase; TIGRFAM- anaerobic ribonucleoside-triphosphate reductase (772 aa)
         
  0.921
rps12
30S ribosomal protein S12; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (147 aa)
   
   
  0.917
Mvol_1256
KEGG- bas-BUsg582 GTP-binding protein EngA; TIGRFAM- small GTP-binding protein; PFAM- GTP-binding protein HSR1-related (186 aa)
     
 
  0.874
Mvol_1539
PFAM- restriction endonuclease; KEGG- vvu-VV1_2450 endonuclease (444 aa)
         
  0.870
Mvol_0543
PFAM- UvrD/REP helicase; KEGG- bab-bbp540 ATP-dependent DNA helicase Rep (1085 aa)
   
 
  0.866
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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