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rpl34e protein (Methanococcus voltae) - STRING interaction network
"rpl34e" - 50S ribosomal protein L34e in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl34e50S ribosomal protein L34e (88 aa)    
Predicted Functional Partners:
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
   
  0.999
rpl32e
50S ribosomal protein L32e (134 aa)
   
  0.999
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
   
  0.999
rpl14
50S ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (132 aa)
   
  0.999
rpl6
50S ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (182 aa)
   
  0.999
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
   
  0.999
rps3ae
30S ribosomal protein S3Ae (218 aa)
   
  0.999
rpl21e
50S ribosomal protein L21e (97 aa)
   
  0.999
rpl18e
50S ribosomal protein L15 (124 aa)
   
  0.999
rps6e
30S ribosomal protein S6e (124 aa)
     
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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