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Mvol_1027 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1027" - DNA-directed RNA polymerase subunit in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1027DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (888 aa)    
Predicted Functional Partners:
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (387 aa)
 
  0.999
Mvol_1028
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (611 aa)
 
  0.999
Mvol_0217
RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type (188 aa)
 
 
  0.998
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (78 aa)
 
 
  0.997
Mvol_1029
PFAM- RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; KEGG- predicted protein; K03010 DNA-directed RNA polymerase II subunit B; Belongs to the RNA polymerase beta chain family (604 aa)
 
  0.996
Mvol_0221
PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L (68 aa)
 
 
  0.996
Mvol_1700
PFAM- RNA polymerase dimerisation; KEGG- predicted protein; K03020 DNA-directed RNA polymerase III subunit C19 (94 aa)
   
 
  0.991
Mvol_1445
PFAM- RNA polymerase Rpb4 (107 aa)
       
 
  0.990
Mvol_0222
PFAM- RNA polymerase Rpb6; KEGG- hypothetical protein; K03014 DNA-directed RNA Polymerase II subunit F (70 aa)
 
 
  0.983
Mvol_0001
TIGRFAM- DNA-directed RNA polymerase; KEGG- hypothetical protein; K03022 DNA-directed RNA polymerase III subunit C25; PFAM- RNA polymerase Rpb7 domain protein; RNA binding S1 domain protein (189 aa)
   
 
  0.981
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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