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Mvol_1029 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1029" - PFAM: RNA polymerase beta subunit in Methanococcus voltae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mvol_1029PFAM- RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; KEGG- predicted protein; K03010 DNA-directed RNA polymerase II subunit B; Belongs to the RNA polymerase beta chain family (604 aa)    
Predicted Functional Partners:
Mvol_1028
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (611 aa)
   
  0.998
Mvol_1027
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (888 aa)
 
  0.996
rpoA2
DNA-directed RNA polymerase subunit A’’; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (387 aa)
 
 
  0.995
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (78 aa)
 
 
  0.989
Mvol_0217
RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type (188 aa)
 
 
  0.979
nusA
Probable transcription termination protein NusA; Participates in transcription termination (189 aa)
 
 
  0.961
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (193 aa)
 
 
  0.960
Mvol_0221
PFAM- RNA polymerase, N/8 Kd subunit; KEGG- DNA-directed RNA polymerase II 8.2 kDa polypeptide; K03007 DNA-directed RNA Polymerase II subunit L (68 aa)
 
 
  0.959
fusA
Elongation factor 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (727 aa)
 
   
  0.953
rps5
30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (221 aa)
 
 
  0.950
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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