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secY protein (Methanococcus voltae) - STRING interaction network
"secY" - Protein translocase subunit SecY in Methanococcus voltae
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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secYProtein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (446 aa)    
Predicted Functional Partners:
secE
Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation (68 aa)
     
 
  0.999
Mvol_1067
annotation not available (54 aa)
       
 
  0.996
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (399 aa)
   
 
  0.933
srp54
Signal recognition particle 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY; Belongs to the GTP-binding SRP family. SRP54 subfamily (450 aa)
     
 
  0.924
adkA
KEGG- bcs-BCAN_A0739 adenylate kinase (192 aa)
         
  0.911
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (333 aa)
 
   
  0.886
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (143 aa)
 
   
  0.848
rpl24
50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit (119 aa)
 
     
  0.839
radA
DNA repair and recombination protein RadA; Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (322 aa)
 
     
  0.835
rps4e
30S ribosomal protein S4e; KEGG- Hypothetical protein CBG05762; K02987 small subunit ribosomal protein S4e; PFAM- Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; SMART- RNA-binding S4 domain protein; Belongs to the eukaryotic ribosomal protein eS4 family (244 aa)
 
   
  0.815
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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