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rps5 protein (Methanococcus voltae) - STRING interaction network
"rps5" - 30S ribosomal protein S5 in Methanococcus voltae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps530S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy (221 aa)    
Predicted Functional Partners:
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
 
  0.999
rps11
30S ribosomal protein S11P; Located on the platform of the 30S subunit (124 aa)
 
  0.999
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
 
  0.999
rps4e
30S ribosomal protein S4E (244 aa)
 
  0.999
rps10
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes (102 aa)
 
  0.999
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (336 aa)
 
  0.999
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (193 aa)
   
  0.999
rps9
30S ribosomal protein S9P (134 aa)
   
  0.999
rps13
30S ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (149 aa)
   
  0.999
rps2
30S ribosomal protein S2 (218 aa)
   
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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