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Mvol_1062 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1062" - PFAM: Protein of unknown function DUF1610 in Methanococcus voltae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
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[Homology]
Score
Mvol_1062PFAM- Protein of unknown function DUF1610 (54 aa)    
Predicted Functional Partners:
Mvol_1467
KEGG- sat-SYN_01979 anaerobic ribonucleoside-triphosphate reductase; TIGRFAM- anaerobic ribonucleoside-triphosphate reductase (772 aa)
           
  0.999
ef1b
Elongation factor 1-beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA (89 aa)
 
     
  0.887
Mvol_1063
PFAM- aspartate/glutamate/uridylate kinase; KEGG- noc-Noc_0254 amino acid kinase family protein (237 aa)
              0.803
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hypothetical protein; K02889 large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (97 aa)
 
          0.661
Mvol_1064
KEGG- sat-SYN_02795 diaminopimelate aminotransferase; TIGRFAM- acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM- peptidase M20; peptidase dimerisation domain protein (460 aa)
              0.660
Mvol_1445
PFAM- RNA polymerase Rpb4 (107 aa)
 
          0.624
rpl22
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (154 aa)
              0.601
fen
Flap endonuclease 1; Structure-specific nuclease with 5’-flap endonuclease and 5’-3’ exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5’-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5’-end of a downstream Okazaki fragment. Binds the unpaired 3’-DNA end and kinks the DNA to facilitate 5’ cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. A [...] (327 aa)
              0.601
pth
Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (116 aa)
              0.601
Mvol_0544
TPR repeat-containing protein; KEGG- hhe-HH1443 putative endonuclease; PFAM- TPR repeat-containing protein; ATPase associated with various cellular activities AAA_5; Tetratricopeptide TPR_2 repeat protein; SMART- Tetratricopeptide repeat (890 aa)
         
  0.575
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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