STRINGSTRING
Mvol_1071 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1071" - Phosphodiesterase, MJ0936 family in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1071Phosphodiesterase, MJ0936 family (209 aa)    
Predicted Functional Partners:
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (828 aa)
   
   
  0.647
Mvol_1457
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase (196 aa)
         
  0.639
Mvol_1226
DNA topoisomerase type IA zn finger domain-containing protein (302 aa)
         
  0.618
Mvol_1414
Radical SAM domain-containing protein (360 aa)
              0.612
Mvol_1348
Radical SAM domain-containing protein (382 aa)
              0.612
bioB
Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism (354 aa)
              0.612
Mvol_1611
ATP-NAD/AcoX kinase (628 aa)
 
   
  0.591
rlmE
Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2’-O position of the ribose in the fully assembled 50S ribosomal subunit (298 aa)
              0.583
Mvol_1070
Transcription termination factor Tfs (105 aa)
   
   
  0.500
Mvol_1401
MCM family protein (687 aa)
   
      0.443
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
Server load: low (14%) [HD]