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rpl4 protein (Methanococcus voltae) - STRING interaction network
"rpl4" - 50S ribosomal protein L4P in Methanococcus voltae
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rpl450S ribosomal protein L4P; Forms part of the polypeptide exit tunnel (253 aa)    
Predicted Functional Partners:
rpl3
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (333 aa)
 
  0.999
rpl18
50S ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
 
  0.999
Mvol_1114
50S ribosomal protein L23 (86 aa)
   
  0.999
rpl2
50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome (241 aa)
   
  0.999
rpl22
50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome (154 aa)
 
  0.999
rpl10
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (336 aa)
 
  0.999
rpl10e
50S ribosomal protein L10.e (173 aa)
 
  0.999
rpl30p
50S ribosomal protein L30P (154 aa)
 
  0.999
rpl24p
50S ribosomal protein L24; Located at the polypeptide exit tunnel on the outside of the subunit (119 aa)
 
  0.999
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (143 aa)
   
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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