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pdaD protein (Methanococcus voltae) - STRING interaction network
"pdaD" - Arginine decarboxylase in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdaDArginine decarboxylase (164 aa)    
Predicted Functional Partners:
Mvol_1153
Agmatinase (290 aa)
       
  0.980
speH
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (117 aa)
         
  0.815
argH
Argininosuccinate lyase (489 aa)
         
    0.800
Mvol_1152
Spermidine synthase (284 aa)
         
  0.795
Mvol_1611
ATP-NAD/AcoX kinase (628 aa)
 
     
  0.696
Mvol_1088
Hypothetical protein (209 aa)
   
          0.557
Mvol_1330
Phosphosulfolactate synthase (254 aa)
   
     
  0.494
Mvol_1149
DNA helicase (732 aa)
              0.484
Mvol_0331
ApbE family lipoprotein (286 aa)
   
          0.458
leuS
leucyl-tRNA synthetase (1000 aa)
 
          0.455
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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