• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mvol_1280 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1280" - PFAM: Protein of unknown function UPF0179 in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1280PFAM- Protein of unknown function UPF0179; Belongs to the UPF0179 family (146 aa)    
Predicted Functional Partners:
Mvol_1465
Glycerol-1-phosphate dehydrogenase [NAD(P)+]; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea (347 aa)
         
  0.864
Mvol_1717
PFAM- Protein of unknown function DUF63 (268 aa)
 
     
  0.861
Mvol_1078
PFAM- Protein of unknown function DUF357 (110 aa)
 
          0.829
Mvol_1168
PFAM- protein of unknown function DUF95 transmembrane (194 aa)
 
     
  0.827
Mvol_1552
PFAM- protein of unknown function DUF116; KEGG- sfu-Sfum_0149 protein of unknown function DUF116 (218 aa)
   
     
  0.674
polC
DNA polymerase II large subunit; Possesses two activities- a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3’- to 5’-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase (1206 aa)
 
          0.632
rps24e
PFAM- Ribosomal protein S24e; KEGG- hypothetical protein; K02974 small subunit ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family (100 aa)
 
          0.632
Mvol_0202
PFAM- Protein of unknown function DUF70; KEGG- gsu-GSU1852 hypothetical protein (377 aa)
           
  0.632
uppS
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific); Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids (264 aa)
           
  0.632
Mvol_1503
PFAM- protein of unknown function DUF75 (251 aa)
 
          0.629
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
Server load: low (7%) [HD]