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Mvol_1320 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1320" - PFAM: translation initiation factor 2, alpha subunit in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
Mvol_1320PFAM- translation initiation factor 2, alpha subunit; RNA binding S1 domain protein; KEGG- SUI2; Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP;-TRUNCATED- (263 aa)    
Predicted Functional Partners:
Mvol_1194
PFAM- CoA-binding domain protein; KEGG- dat-HRM2_16770 SucD3 (707 aa)
       
 
  0.992
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
   
 
  0.991
eif2b
Translation initiation factor 2 subunit beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA (140 aa)
   
 
  0.991
rps6e
PFAM- Ribosomal protein S6e; KEGG- 40S ribosomal protein S6; K02991 small subunit ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family (124 aa)
   
 
  0.989
rps17
30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5’-end of 16S ribosomal RNA (108 aa)
   
 
  0.986
rps13
30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement (149 aa)
     
      0.986
rps27e
PFAM- Ribosomal protein S27E; KEGG- structural constituent of ribosome (61 aa)
   
 
  0.978
rps4e
30S ribosomal protein S4e; KEGG- Hypothetical protein CBG05762; K02987 small subunit ribosomal protein S4e; PFAM- Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; SMART- RNA-binding S4 domain protein; Belongs to the eukaryotic ribosomal protein eS4 family (244 aa)
   
      0.975
rps3ae
PFAM- ribosomal protein S3Ae; KEGG- hypothetical protein; K02984 small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family (218 aa)
   
 
  0.973
nop10
Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (51 aa)
   
   
  0.962
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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