STRINGSTRING
Mvol_1353 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1353" - TrkA-N domain-containing protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1353TrkA-N domain-containing protein (489 aa)    
Predicted Functional Partners:
Mvol_1352
CBS domain-containing protein (259 aa)
 
     
  0.860
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) (353 aa)
   
 
  0.852
hisC
Histidinol-phosphate aminotransferase (370 aa)
   
      0.851
gap
Glyceraldehyde-3-phosphate dehydrogenase, type II (352 aa)
 
   
  0.829
Mvol_1181
Chromosome segregation and condensation protein ScpA (234 aa)
 
          0.783
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (828 aa)
         
  0.780
Mvol_1491
Cation transporter (482 aa)
     
 
  0.761
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning (1199 aa)
 
   
  0.723
truB
rRNA pseudouridine synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs (336 aa)
   
   
  0.719
Mvol_1334
Inosine-5’-monophosphate dehydrogenase (498 aa)
   
   
  0.716
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
Server load: low (16%) [HD]