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Mvol_1365 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1365" - PFAM: NMD3 family protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1365PFAM- NMD3 family protein; KEGG- nonsense-mediated mRNA decay protein; K07562 nonsense-mediated mRNA decay protein 3 (377 aa)    
Predicted Functional Partners:
Mvol_0893
KEGG- hypothetical protein; TIGRFAM- small GTP-binding protein; PFAM- GTP-binding protein HSR1-related; Nucleolar GTP-binding-1 domain protein; Miro domain protein (354 aa)
 
 
  0.999
Mvol_0348
TIGRFAM- KH domain protein; PFAM- K Homology, type 1, subgroup; KEGG- predicted protein; K06961; SMART- KH domain protein (186 aa)
 
   
  0.981
Mvol_0625
PFAM- GTP-binding protein HSR1-related; KEGG- hypothetical protein (472 aa)
   
 
  0.963
Mvol_1415
PFAM- Protein of unknown function UPF0113; KEGG- Ribosome subunit biogenesis protein NIP7 (166 aa)
     
   
  0.962
Mvol_1206
Probable Brix domain-containing ribosomal biogenesis protein; Probably involved in the biogenesis of the ribosome (180 aa)
   
   
  0.961
Mvol_1680
SMART- Nucleotide binding protein PINc; KEGG- predicted protein; K11883 RNA-binding protein NOB1 (208 aa)
 
   
  0.951
ksgA
Probable ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (275 aa)
     
   
  0.946
rpl24e
50S ribosomal protein L24e; Binds to the 23S rRNA (63 aa)
   
 
  0.945
trm1
tRNA (guanine(26)-N(2))-dimethyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups (376 aa)
   
        0.942
Mvol_1140
SMART- Elongator protein 3/MiaB/NifB; TIGRFAM- histone acetyltransferase, ELP3 family; KEGG- histone acetyltransferase gcn5-type hat; K07739 elongator complex protein 3; PFAM- Radical SAM domain protein; GCN5-related N-acetyltransferase (553 aa)
     
   
  0.940
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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