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rplX protein (Methanococcus voltae) - STRING interaction network
"rplX" - Ribosomal LX protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplXRibosomal LX protein (76 aa)    
Predicted Functional Partners:
rpl15e
50S ribosomal protein L15e (194 aa)
     
  0.999
rpl31e
50S ribosomal protein L31e (83 aa)
   
  0.999
rpl30e
50S ribosomal protein L7Ae/L30e/S12e/Gadd45 (99 aa)
     
  0.999
rpl10e
50S ribosomal protein L10.e (173 aa)
     
  0.999
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)
   
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
     
  0.999
rpl5
50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs (181 aa)
     
  0.999
rpl29p
50S ribosomal protein L29 (69 aa)
     
  0.999
rpl18
50S ribosomal protein L18P/L5E; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
     
  0.999
rpl15
50S ribosomal protein L15; Binds to the 23S rRNA (143 aa)
     
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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