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Mvol_1413 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1413" - Transcriptional regulator, LysR family in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1413Transcriptional regulator, LysR family; PFAM- regulatory protein LysR; KEGG- myosin d (311 aa)    
Predicted Functional Partners:
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine (318 aa)
         
  0.701
Mvol_1578
PFAM- ferredoxin; KEGG- geo-Geob_2544 ferredoxin (689 aa)
         
  0.682
Mvol_0217
RNA polymerase insert; KEGG- hypothetical protein; K03027 DNA-directed RNA Polymerase III subunit C5; PFAM- RNA polymerase insert; RNA polymerase dimerisation; SMART- RNA polymerase RpoA/D/Rpb3-type (188 aa)
     
 
  0.553
Mvol_1414
KEGG- dat-HRM2_15240 BioB2; PFAM- Radical SAM domain protein; SMART- Elongator protein 3/MiaB/NifB (360 aa)
         
  0.549
Mvol_0620
Iron (Metal) dependent repressor, DtxR family; KEGG- tcx-Tcr_0904 iron dependent repressor; PFAM- iron dependent repressor; SMART- iron dependent repressor (140 aa)
     
 
  0.544
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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