• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
pelA protein (Methanococcus voltae) - STRING interaction network
"pelA" - Protein pelota homolog in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pelAProtein pelota homolog; May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity (348 aa)    
Predicted Functional Partners:
tuf
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis (428 aa)
   
 
  0.936
Mvol_1427
Putative transcriptional regulatory protein Mvol_1427; Putative transcriptional regulator (146 aa)
 
          0.923
Mvol_1672
ABC transporter related protein; KEGG- ribonuclease L inhibitor; K06174 ATP-binding cassette, sub-family E, member 1; PFAM- ABC transporter related; 4Fe-4S ferredoxin iron-sulfur binding domain protein; metal-binding domain in RNase L inhibitor, RLI; SMART- AAA ATPase (590 aa)
 
 
  0.909
rpl15e
PFAM- Ribosomal protein L15e; KEGG- hypothetical protein LOC100263573; Belongs to the eukaryotic ribosomal protein eL15 family (194 aa)
 
 
      0.869
rps24e
PFAM- Ribosomal protein S24e; KEGG- hypothetical protein; K02974 small subunit ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family (100 aa)
   
      0.866
rpl32e
PFAM- Ribosomal protein L32e; KEGG- rpl32; 60S ribosomal protein L32; K02912 large subunit ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family (134 aa)
 
 
      0.862
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
 
 
 
  0.861
rps6e
PFAM- Ribosomal protein S6e; KEGG- 40S ribosomal protein S6; K02991 small subunit ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family (124 aa)
   
 
 
  0.860
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)
   
 
  0.856
Mvol_1000
PFAM- Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG- similar to conserved hypothetical protein (722 aa)
 
 
  0.855
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
Server load: low (7%) [HD]