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Mvol_1503 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1503" - PFAM: protein of unknown function DUF75 in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1503PFAM- protein of unknown function DUF75 (251 aa)    
Predicted Functional Partners:
rpl44e
50S ribosomal protein L44e; Binds to the 23S rRNA (93 aa)
 
          0.845
Mvol_1502
KEGG- nis-NIS_1524 hypothetical protein (215 aa)
         
  0.775
rps27e
PFAM- Ribosomal protein S27E; KEGG- structural constituent of ribosome (61 aa)
 
          0.727
nop10
Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (51 aa)
 
          0.726
Mvol_1320
PFAM- translation initiation factor 2, alpha subunit; RNA binding S1 domain protein; KEGG- SUI2; Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start codon; phosphorylation of Ser51 is required for regulation of translation by inhibiting the exchange of GDP for GTP;-TRUNCATED- (263 aa)
 
          0.716
Mvol_0974
PFAM- protein of unknown function DUF75; KEGG- fth-FTH_0200 hypothetical protein (321 aa)
 
     
  0.714
priS
DNA primase small subunit PriS; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthe [...] (369 aa)
 
          0.705
Mvol_1448
PFAM- PHP domain protein; KEGG- gur-Gura_2545 hypothetical protein (396 aa)
              0.648
Mvol_1280
PFAM- Protein of unknown function UPF0179; Belongs to the UPF0179 family (146 aa)
 
          0.629
rps24e
PFAM- Ribosomal protein S24e; KEGG- hypothetical protein; K02974 small subunit ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family (100 aa)
 
          0.624
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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