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Mvol_1546 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1546" - PFAM: integrase family protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1546PFAM- integrase family protein; KEGG- glo-Glov_0341 tyrosine recombinase XerC (320 aa)    
Predicted Functional Partners:
Mvol_1545
annotation not available (81 aa)
              0.856
Mvol_1544
annotation not available (85 aa)
              0.629
Mvol_1543
annotation not available (56 aa)
              0.629
Mvol_1541
annotation not available (61 aa)
              0.621
Mvol_1542
annotation not available (53 aa)
              0.608
Mvol_1547
KEGG- rhoptry protein; PFAM- type III restriction protein res subunit; SMART- DEAD-like helicase (1191 aa)
         
  0.576
Mvol_1540
KEGG- protein serine/threonine kinase; K08860 eukaryotic translation initiation factor 2-alpha kinase (127 aa)
         
  0.435
rnhB
Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids; Belongs to the RNase HII family (264 aa)
 
     
  0.434
topA
DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (828 aa)
 
   
  0.417
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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