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rpl40e protein (Methanococcus voltae) - STRING interaction network
"rpl40e" - Hypothetical protein in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl40eHypothetical protein (47 aa)    
Predicted Functional Partners:
rpl32e
50S ribosomal protein L32e (134 aa)
   
  0.999
rpl15e
50S ribosomal protein L15e (194 aa)
   
  0.999
rpl34e
50S ribosomal protein L34e (88 aa)
   
  0.999
rpl29p
50S ribosomal protein L29 (69 aa)
   
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
   
  0.999
rplX
Ribosomal LX protein (76 aa)
     
  0.999
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)
     
  0.999
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
     
  0.999
rpl44e
50S ribosomal protein L44E; Binds to the 23S rRNA (93 aa)
   
 
  0.999
rps24e
30S ribosomal protein S24e (100 aa)
 
 
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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