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Mvol_1566 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1566" - PFAM: protein of unknown function UPF0044 in Methanococcus voltae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1566PFAM- protein of unknown function UPF0044; KEGG- ftn-FTN_0552 RNA-binding protein (132 aa)    
Predicted Functional Partners:
Mvol_0155
KEGG- dds-Ddes_2329 signal peptide peptidase SppA, 36K type; TIGRFAM- signal peptide peptidase SppA, 36K type; PFAM- peptidase S49 (367 aa)
 
          0.751
Mvol_1572
KEGG- tdn-Suden_0026 thiamine biosynthesis protein-ExsB (197 aa)
 
          0.695
rnp4
Ribonuclease P protein component 4; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5’-ends (145 aa)
 
          0.670
rpl39e
PFAM- Ribosomal protein L39e; KEGG- RpL39; Ribosomal protein L39; K02924 large subunit ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family (51 aa)
 
          0.649
ftsY
Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (399 aa)
         
  0.640
pfdA
Prefoldin subunit alpha; Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding (149 aa)
              0.601
Mvol_1571
PFAM- DNA-binding TFAR19-related protein; KEGG- hypothetical protein; K06875; Belongs to the PDCD5 family (117 aa)
              0.601
rps19e
30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)
              0.601
rplX
PFAM- Ribosomal LX protein (76 aa)
              0.601
eif6
Translation initiation factor 6; Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex (227 aa)
              0.601
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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