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rps19e protein (Methanococcus voltae) - STRING interaction network
"rps19e" - 30S ribosomal protein S19e in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps19e30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)    
Predicted Functional Partners:
rps17e
30S ribosomal protein S17e (65 aa)
 
  0.999
rps4e
30S ribosomal protein S4E (244 aa)
   
  0.999
rps7
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center (193 aa)
   
  0.999
rps6e
30S ribosomal protein S6e (124 aa)
   
  0.999
rps28e
30S ribosomal protein S28e (76 aa)
   
  0.999
rps3ae
30S ribosomal protein S3Ae (218 aa)
   
  0.999
rps27e
30S ribosomal protein S27E (61 aa)
   
  0.999
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
     
  0.999
rps24e
30S ribosomal protein S24e (100 aa)
     
  0.999
rps3
30S ribosomal protein S3; Binds the lower part of the 30S subunit head (218 aa)
     
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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