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rps19e protein (Methanococcus voltae) - STRING interaction network
"rps19e" - 30S ribosomal protein S19e in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps19e30S ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit (141 aa)    
Predicted Functional Partners:
rpl21e
PFAM- Ribosomal protein L21e; KEGG- hypothetical protein; K02889 large subunit ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family (97 aa)
 
 
  0.999
rpl31e
PFAM- Ribosomal protein L31e; KEGG- rpl31; 60S ribosomal protein L31; K02910 large subunit ribosomal protein L31e; Belongs to the ribosomal protein L31e family (83 aa)
 
 
  0.999
rpl19e
50S ribosomal protein L19e; Binds to the 23S rRNA (149 aa)
 
 
  0.999
rps4e
30S ribosomal protein S4e; KEGG- Hypothetical protein CBG05762; K02987 small subunit ribosomal protein S4e; PFAM- Ribosomal protein S4E, central domain protein; Ribosomal protein S4E domain protein; RNA-binding S4 domain protein; SMART- RNA-binding S4 domain protein; Belongs to the eukaryotic ribosomal protein eS4 family (244 aa)
   
 
  0.999
rpl15e
PFAM- Ribosomal protein L15e; KEGG- hypothetical protein LOC100263573; Belongs to the eukaryotic ribosomal protein eL15 family (194 aa)
   
 
  0.999
rps6e
PFAM- Ribosomal protein S6e; KEGG- 40S ribosomal protein S6; K02991 small subunit ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family (124 aa)
   
 
  0.999
rpl18
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (194 aa)
 
 
  0.999
rpl32e
PFAM- Ribosomal protein L32e; KEGG- rpl32; 60S ribosomal protein L32; K02912 large subunit ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family (134 aa)
 
 
  0.999
rps17e
30S ribosomal protein S17e; KEGG- AGAP004887-PA; K02962 small subunit ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family (65 aa)
   
 
  0.999
rpl37ae
50S ribosomal protein L37Ae; Binds to the 23S rRNA (96 aa)
   
 
  0.999
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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