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STRINGSTRING
Mvol_1645 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1645" - PFAM: protein of unknown function DUF92 transmembrane in Methanococcus voltae
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1645PFAM- protein of unknown function DUF92 transmembrane; KEGG- similar to CG10171-PA, isoform A (237 aa)    
Predicted Functional Partners:
uppS
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific); Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids (264 aa)
         
  0.965
Mvol_1104
PFAM- protein of unknown function DUF112 transmembrane; KEGG- hypothetical protein (487 aa)
   
     
  0.695
Mvol_0198
annotation not available (453 aa)
           
  0.650
apgM
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate (406 aa)
              0.608
Mvol_1646
PFAM- histidine triad (HIT) protein; KEGG- HIT family protein (131 aa)
         
  0.599
rps3ae
PFAM- ribosomal protein S3Ae; KEGG- hypothetical protein; K02984 small subunit ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family (218 aa)
              0.567
Mvol_1386
Dimethylallyltranstransferase; KEGG- dal-Dalk_3236 polyprenyl synthetase; PFAM- Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family (316 aa)
   
   
  0.549
valS
Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a "posttransfer" editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 2 subfamily (907 aa)
              0.544
Mvol_1261
Isopentenyl phosphate kinase; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids (264 aa)
 
          0.524
Mvol_1189
KEGG- RNA methyltransferase, TrmH family; K02533 tRNA/rRNA methyltransferase; TIGRFAM- RNA methyltransferase, TrmH family, group 1; PFAM- tRNA/rRNA methyltransferase (SpoU) (246 aa)
              0.520
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3
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