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Mvol_1680 protein (Methanococcus voltae) - STRING interaction network
"Mvol_1680" - Nucleotide binding protein PINc in Methanococcus voltae
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mvol_1680Nucleotide binding protein PINc (208 aa)    
Predicted Functional Partners:
Mvol_0348
KH domain-containing protein (186 aa)
   
  0.997
Mvol_1426
RIO-like kinase (295 aa)
     
  0.994
rps8
30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit (130 aa)
     
  0.980
Mvol_1206
Brix domain-containing protein; Probably involved in the biogenesis of the ribosome (180 aa)
     
 
  0.980
rps8e
30S ribosomal protein S8e (128 aa)
   
  0.967
Mvol_0151
RIO-like kinase (297 aa)
     
  0.948
Mvol_0036
Hypothetical protein (150 aa)
     
 
  0.946
Mvol_0036
Hypothetical protein (150 aa)
     
 
  0.946
rps3ae
30S ribosomal protein S3Ae (218 aa)
   
 
  0.922
flpA
Fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2’-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA (228 aa)
     
  0.921
Your Current Organism:
Methanococcus voltae
NCBI taxonomy Id: 456320
Other names: M. voltae, M. voltae A3, Methanococcus voltae, Methanococcus voltae A3, Methanococcus voltae str. A3, Methanococcus voltae strain A3, Methanococcus voltaei
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