STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_0636KEGG: sdy:SDY_2191 hypothetical protein. (255 aa)    
Predicted Functional Partners:
Mboo_0637
PFAM: von Willebrand factor, type A; KEGG: ecc:c2599 hypothetical protein YegL.
 
     0.930
Mboo_0635
KEGG: eci:UTI89_C2346 hypothetical protein YegI.
 
     0.924
Mboo_1321
PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: mhu:Mhun_2725 uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like.
 
     0.521
Mboo_0634
Hypothetical protein.
       0.509
Mboo_0638
PFAM: PKD domain containing protein; cell surface receptor IPT/TIG domain protein; KEGG: mma:MM1588 surface layer protein B.
       0.417
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.