STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (314 aa)    
Predicted Functional Partners:
ftr
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) and methanofuran (MFR); Belongs to the FTR family.
 
 
 0.985
Mboo_0993
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase; PFAM: formylmethanofuran: tetrahydromethanopterin formyltransferase (Ftr); KEGG: mhu:Mhun_1808 formylmethanofuran--tetrahydromethanopterin N-formyltransferase.
 
 
 0.985
mtd
Methylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT.
    
 0.958
Mboo_0875
Formylmethanofuran dehydrogenase; PFAM: glutamate synthase, alpha subunit domain protein; KEGG: mhu:Mhun_1981 formylmethanofuran dehydrogenase.
   
 0.913
Mboo_1473
Formylmethanofuran dehydrogenase; PFAM: glutamate synthase, alpha subunit domain protein; KEGG: mhu:Mhun_1990 formylmethanofuran dehydrogenase.
   
 0.826
Mboo_1415
PFAM: triphosphoribosyl-dephospho-CoA protein; KEGG: mhu:Mhun_0666 triphosphoribosyl-dephospho-CoA protein.
 
     0.799
Mboo_0876
PFAM: Amidohydrolase 3; KEGG: mhu:Mhun_1982 amidohydrolase 3.
 
   
 0.782
Mboo_1472
PFAM: Amidohydrolase 3; KEGG: mhu:Mhun_1989 amidohydrolase 3.
 
   
 0.782
Mboo_1278
PFAM: protein of unknown function DUF201; KEGG: mhu:Mhun_2798 protein of unknown function DUF201.
 
     0.774
mfnB
Protein of unknown function DUF556; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P).
 
     0.750
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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