STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mboo_1320Conserved hypothetical protein; KEGG: gvi:glr3041 unknown protein. (302 aa)    
Predicted Functional Partners:
Mboo_1319
Hypothetical protein; KEGG: eba:p1B320 tellurium resistance protein.
       0.777
Mboo_1321
PFAM: protein kinase; SMART: serine/threonine protein kinase; KEGG: mhu:Mhun_2725 uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains-like.
       0.777
Mboo_1322
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ter:Tery_1841 peptidase C14, caspase catalytic subunit P20.
       0.773
Mboo_1323
KEGG: mhu:Mhun_2299 hypothetical protein.
       0.538
Mboo_1318
Hypothetical protein.
       0.460
Mboo_1324
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mhu:Mhun_1169 radical SAM.
       0.444
Mboo_1325
PFAM: metallophosphoesterase; KEGG: mhu:Mhun_1168 metallophosphoesterase.
       0.444
Your Current Organism:
Methanoregula boonei
NCBI taxonomy Id: 456442
Other names: Candidatus Methanoregula boonei 6A8, M. boonei 6A8, Methanoregula boonei 6A8, Methanoregula boonei str. 6A8, Methanoregula boonei strain 6A8, methanogenic archaeon 6A8
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