node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mboo_0939 | Mboo_1108 | Mboo_0939 | Mboo_1108 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | 0.726 |
Mboo_0939 | Mboo_1253 | Mboo_0939 | Mboo_1253 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | PFAM: DNA polymerase B region; KEGG: afu:AF0693m DNA polymerase II. | 0.768 |
Mboo_0939 | Mboo_1664 | Mboo_0939 | Mboo_1664 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | KEGG: mhu:Mhun_0833 replication factor C subunit. | 0.515 |
Mboo_0939 | Mboo_2057 | Mboo_0939 | Mboo_2057 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | KEGG: mma:MM0209 hypothetical protein. | 0.728 |
Mboo_0939 | fen | Mboo_0939 | Mboo_2106 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | XPG I; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genom [...] | 0.969 |
Mboo_0939 | lig | Mboo_0939 | Mboo_2156 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.728 |
Mboo_0939 | pcn | Mboo_0939 | Mboo_1392 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family. | 0.533 |
Mboo_0939 | rfcL | Mboo_0939 | Mboo_1074 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | AAA ATPase, central domain protein; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.574 |
Mboo_0939 | rfcS | Mboo_0939 | Mboo_1674 | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | Replication factor C; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.515 |
Mboo_1108 | Mboo_0939 | Mboo_1108 | Mboo_0939 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | 0.726 |
Mboo_1108 | Mboo_1253 | Mboo_1108 | Mboo_1253 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | PFAM: DNA polymerase B region; KEGG: afu:AF0693m DNA polymerase II. | 0.922 |
Mboo_1108 | Mboo_1664 | Mboo_1108 | Mboo_1664 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | KEGG: mhu:Mhun_0833 replication factor C subunit. | 0.799 |
Mboo_1108 | Mboo_2057 | Mboo_1108 | Mboo_2057 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | KEGG: mma:MM0209 hypothetical protein. | 0.737 |
Mboo_1108 | fen | Mboo_1108 | Mboo_2106 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | XPG I; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genom [...] | 0.936 |
Mboo_1108 | lig | Mboo_1108 | Mboo_2156 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | DNA ligase I, ATP-dependent Dnl1; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair. | 0.740 |
Mboo_1108 | pcn | Mboo_1108 | Mboo_1392 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | Proliferating cell nuclear antigen, PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family. | 0.976 |
Mboo_1108 | polB | Mboo_1108 | Mboo_0035 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | DNA-directed DNA polymerase; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family. | 0.963 |
Mboo_1108 | rfcL | Mboo_1108 | Mboo_1074 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | AAA ATPase, central domain protein; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcL subfamily. | 0.830 |
Mboo_1108 | rfcS | Mboo_1108 | Mboo_1674 | PFAM: DNA polymerase B, exonuclease; DNA polymerase B region; SMART: DNA-directed DNA polymerase B; KEGG: mhu:Mhun_1156 DNA polymerase B region. | Replication factor C; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.787 |
Mboo_1253 | Mboo_0939 | Mboo_1253 | Mboo_0939 | PFAM: DNA polymerase B region; KEGG: afu:AF0693m DNA polymerase II. | PFAM: SMC domain protein; KEGG: mtp:Mthe_1484 SMC domain protein. | 0.768 |