STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3B6ATB5Pectinesterase. (587 aa)    
Predicted Functional Partners:
A0A3B6FWD7
Pectate lyase.
  
 
  0.922
A0A3B6ARU9
Pectate lyase.
  
 
  0.912
A0A3B6R941
Pectate lyase.
  
 
  0.889
A0A3B6EQ27
Pectate lyase.
  
 
  0.882
A0A3B6GXV1
Pectate lyase.
  
 
  0.882
A0A3B6RJ26
Pectate lyase.
  
 
  0.871
A0A3B6SMJ1
Pectate lyase.
  
 
  0.871
A0A3B5XUH7
Uncharacterized protein.
    
 0.870
A0A3B5YRV4
Uncharacterized protein.
    
 0.870
A0A3B5YSM7
Uncharacterized protein.
    
 0.870
Your Current Organism:
Triticum aestivum
NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.