A0A3B6EP72 protein (Triticum aestivum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A3B6EP72

RING-type domain-containing protein. (342 aa)

Predicted Functional Partners:

A0A1D6DKE6

0.688

W5A9E1_WHEAT

0.688

W5ADS2_WHEAT

0.688

A0A3B5XUV0

0.547

A0A3B5Y335

0.547

A0A3B5Z151

0.547

A0A3B5ZYP8

0.547

A0A3B6AR18

0.547

A0A3B6BYW2

0.547

A0A3B6EU65

0.547

Your Current Organism:

Triticum aestivum

NCBI taxonomy Id: 4565
Other names: Canadian hard winter wheat, T. aestivum, Triticum aestivum L., Triticum aestivum subsp. aestivum, Triticum vulgare, Triticum vulgare L., Triticum vulgare Vill., nom. illeg., bread wheat, common wheat, wheat

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D6DKE6	A0A3B5XUV0	A0A1D6DKE6	A0A3B5XUV0	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.924
A0A1D6DKE6	A0A3B5Y335	A0A1D6DKE6	A0A3B5Y335	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.924
A0A1D6DKE6	A0A3B5Z151	A0A1D6DKE6	A0A3B5Z151	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.924
A0A1D6DKE6	A0A3B5ZYP8	A0A1D6DKE6	A0A3B5ZYP8	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.924
A0A1D6DKE6	A0A3B6AR18	A0A1D6DKE6	A0A3B6AR18	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.923
A0A1D6DKE6	A0A3B6BYW2	A0A1D6DKE6	A0A3B6BYW2	Ubiquitin-like domain-containing protein.	HECT domain-containing protein.	0.923
A0A1D6DKE6	A0A3B6EP72	A0A1D6DKE6	A0A3B6EP72	Ubiquitin-like domain-containing protein.	RING-type domain-containing protein.	0.688
A0A1D6DKE6	A0A3B6EU65	A0A1D6DKE6	A0A3B6EU65	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.924
A0A3B5XUV0	A0A1D6DKE6	A0A3B5XUV0	A0A1D6DKE6	HECT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.924
A0A3B5XUV0	A0A3B5Y335	A0A3B5XUV0	A0A3B5Y335	HECT domain-containing protein.	HECT domain-containing protein.	0.999
A0A3B5XUV0	A0A3B5Z151	A0A3B5XUV0	A0A3B5Z151	HECT domain-containing protein.	HECT domain-containing protein.	0.999
A0A3B5XUV0	A0A3B5ZYP8	A0A3B5XUV0	A0A3B5ZYP8	HECT domain-containing protein.	HECT domain-containing protein.	0.999
A0A3B5XUV0	A0A3B6AR18	A0A3B5XUV0	A0A3B6AR18	HECT domain-containing protein.	HECT domain-containing protein.	0.999
A0A3B5XUV0	A0A3B6BYW2	A0A3B5XUV0	A0A3B6BYW2	HECT domain-containing protein.	HECT domain-containing protein.	0.999
A0A3B5XUV0	A0A3B6EP72	A0A3B5XUV0	A0A3B6EP72	HECT domain-containing protein.	RING-type domain-containing protein.	0.547
A0A3B5XUV0	A0A3B6EU65	A0A3B5XUV0	A0A3B6EU65	HECT domain-containing protein.	Uncharacterized protein.	0.999
A0A3B5XUV0	W5A9E1_WHEAT	A0A3B5XUV0	W5A9E1	HECT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.924
A0A3B5XUV0	W5ADS2_WHEAT	A0A3B5XUV0	W5ADS2	HECT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.924
A0A3B5Y335	A0A1D6DKE6	A0A3B5Y335	A0A1D6DKE6	HECT domain-containing protein.	Ubiquitin-like domain-containing protein.	0.924
A0A3B5Y335	A0A3B5XUV0	A0A3B5Y335	A0A3B5XUV0	HECT domain-containing protein.	HECT domain-containing protein.	0.999

page 1 of 6

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Neighborhood

Databases

Fusion

Textmining

Coexpression

© STRING Consortium 2024

Credits

Access

Info

About