STRINGSTRING
RSAG_00005 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00005" - RsmD family RNA methyltransferase in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00005RsmD family RNA methyltransferase (189 aa)    
Predicted Functional Partners:
RSAG_00004
Methylglyoxal synthase (131 aa)
              0.859
RSAG_00495
Pseudouridine synthase (255 aa)
 
        0.734
coaD
Pantetheine-phosphate adenylyltransferase ; Reversibly transfers an adenylyl group from ATP to 4’- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate (164 aa)
   
        0.732
coaE
Dephosphocoenzyme A kinase ; Catalyzes the phosphorylation of the 3’-hydroxyl group of dephosphocoenzyme A to form coenzyme A (199 aa)
 
 
    0.707
RSAG_00234
No annotation available (323 aa)
 
        0.679
ftsY
Signal recognition particle receptor FtsY ; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) (316 aa)
 
   
  0.672
RSAG_02461
Uncharacterized protein (467 aa)
   
 
  0.668
RSAG_00007
Uncharacterized protein (210 aa)
              0.666
RSAG_02432
23S rRNA (Uracil-5-)-methyltransferase RumA (454 aa)
   
 
    0.665
RSAG_01824
23S rRNA (Uracil-5-)-methyltransferase RumA (545 aa)
   
 
    0.665
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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