STRINGSTRING
RSAG_00008 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00008" - Sporulation integral membrane protein YlbJ in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00008Sporulation integral membrane protein YlbJ (308 aa)    
Predicted Functional Partners:
RSAG_02836
Stage V sporulation protein AC (154 aa)
   
          0.777
RSAG_02835
Stage V sporulation protein AD (356 aa)
   
          0.777
gpr
Spore protease ; Initiates the rapid degradation of small, acid-soluble proteins during spore germination (304 aa)
   
          0.777
RSAG_02834
Stage V sporulation protein AE (118 aa)
   
          0.776
RSAG_00751
Stage IV sporulation protein B (409 aa)
   
          0.776
RSAG_00770
Stage III sporulation protein AA (312 aa)
   
          0.775
RSAG_03196
Stage V sporulation protein T (182 aa)
   
          0.774
RSAG_00003
Uncharacterized protein (109 aa)
   
          0.774
RSAG_02148
Stage II sporulation protein P (366 aa)
   
          0.772
RSAG_03274
Sporulation protein YabP (93 aa)
   
          0.769
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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