STRINGSTRING
RSAG_00012 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00012" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00012Uncharacterized protein (217 aa)    
Predicted Functional Partners:
RSAG_00011
UPF0313 protein RSAG_00011 (648 aa)
            0.967
RSAG_02628
Uncharacterized protein (415 aa)
   
          0.774
RSAG_01731
Uncharacterized protein (85 aa)
   
          0.774
RSAG_02196
Uncharacterized protein (254 aa)
   
          0.773
RSAG_02672
Uncharacterized protein (443 aa)
   
          0.770
RSAG_02658
Uncharacterized protein (122 aa)
   
          0.769
RSAG_02671
Uncharacterized protein (279 aa)
   
          0.768
RSAG_02138
Uncharacterized protein (144 aa)
   
          0.765
RSAG_00847
Uncharacterized protein (409 aa)
   
          0.764
RSAG_02656
Uncharacterized protein (813 aa)
   
          0.756
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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