STRINGSTRING
recU protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"recU" - Recombination protein U homolog in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recURecombination protein U homolog ; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation (177 aa)    
Predicted Functional Partners:
RSAG_00013
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (341 aa)
              0.813
RSAG_00014
Signal peptidase I (186 aa)
              0.771
RSAG_03173
Uncharacterized protein (121 aa)
   
          0.748
RSAG_01401
Uncharacterized protein (90 aa)
   
          0.708
RSAG_01977
1A family penicillin-binding protein (863 aa)
 
   
  0.676
RSAG_03258
Uncharacterized protein (264 aa)
   
          0.645
RSAG_00012
Uncharacterized protein (217 aa)
              0.642
RSAG_02137
Uncharacterized protein (365 aa)
   
          0.627
RSAG_01707
Uncharacterized protein (137 aa)
   
          0.624
RSAG_02945
Uncharacterized protein (85 aa)
   
          0.616
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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