STRINGSTRING
RSAG_00021 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00021" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00021Uncharacterized protein (465 aa)    
Predicted Functional Partners:
RSAG_00022
Uncharacterized protein (365 aa)
          0.952
cbiA
Cobyrinic acid a,c-diamide synthetase ; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source (464 aa)
 
   
  0.921
RSAG_00023
Uncharacterized protein (397 aa)
 
          0.918
RSAG_01285
Precorrin-4 C11-methyltransferase (258 aa)
   
  0.913
RSAG_01284
Uncharacterized protein (373 aa)
 
   
  0.912
RSAG_01242
Uroporphyrinogen-III C-methyltransferase (501 aa)
 
   
  0.908
RSAG_01282
Precorrin-6x reductase (683 aa)
 
   
  0.903
RSAG_02255
Precorrin-2 C20-methyltransferase (231 aa)
   
  0.900
RSAG_01244
Siroheme synthase domain-containing protein (165 aa)
       
  0.850
RSAG_00025
Uncharacterized protein (385 aa)
 
          0.837
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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