STRINGSTRING
RSAG_00028 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00028" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00028Uncharacterized protein (540 aa)    
Predicted Functional Partners:
RSAG_02164
Uncharacterized protein (178 aa)
   
          0.746
RSAG_02761
Uncharacterized protein (360 aa)
   
          0.731
RSAG_03404
Uncharacterized protein (126 aa)
   
          0.694
RSAG_01128
Phage tail tape measure protein, TP901 family, core region (1445 aa)
   
          0.684
RSAG_02762
Uncharacterized protein (310 aa)
   
          0.645
RSAG_00027
Uncharacterized protein (87 aa)
              0.627
RSAG_02763
Uncharacterized protein (286 aa)
   
          0.567
RSAG_02782
Uncharacterized protein (111 aa)
   
          0.565
RSAG_02781
Uncharacterized protein (134 aa)
   
          0.564
RSAG_03139
Uncharacterized protein (803 aa)
   
          0.562
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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