STRINGSTRING
RSAG_00049 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00049" - Hydrogenase, Fe-only in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00049Hydrogenase, Fe-only (562 aa)    
Predicted Functional Partners:
RSAG_00048
Uncharacterized protein (623 aa)
 
  0.999
RSAG_02173
Uncharacterized protein (625 aa)
 
  0.999
RSAG_00047
Uncharacterized protein (159 aa)
 
  0.999
RSAG_02174
Uncharacterized protein (160 aa)
 
  0.999
RSAG_01202
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
    0.961
RSAG_00782
Acyl carrier protein ; Carrier of the growing fatty acid chain in fatty acid biosynthesis (77 aa)
     
    0.961
RSAG_02885
Iron-sulfur cluster carrier protein ; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP (276 aa)
   
  0.945
RSAG_00639
Glutamate synthase (NADPH), homotetrameric (464 aa)
 
 
  0.924
RSAG_03252
Uncharacterized protein (57 aa)
       
  0.913
RSAG_00855
Uncharacterized protein (239 aa)
       
  0.913
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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