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RSAG_00058 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00058" - Hydrogenase maturation GTPase HydF in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00058Hydrogenase maturation GTPase HydF (402 aa)    
Predicted Functional Partners:
RSAG_00057
Iron-only hydrogenase maturation rSAM protein HydG (482 aa)
   
  0.988
RSAG_00056
Iron-only hydrogenase maturation rSAM protein HydE (349 aa)
     
  0.978
RSAG_00055
Uncharacterized protein (90 aa)
 
          0.914
RSAG_00049
Hydrogenase, Fe-only (562 aa)
 
   
  0.908
rplN
50S ribosomal protein L14 ; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome (122 aa)
       
      0.850
RSAG_02171
Uncharacterized protein (574 aa)
 
   
  0.827
rplA
50S ribosomal protein L1 ; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (230 aa)
     
 
  0.823
RSAG_01507
Uncharacterized protein (505 aa)
 
   
  0.773
rplX
50S ribosomal protein L24 ; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit (103 aa)
     
 
  0.750
rplF
50S ribosomal protein L6 ; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center (179 aa)
     
 
  0.737
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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