STRINGSTRING
RSAG_00085 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00085" - Citrate synthase in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00085Citrate synthase (466 aa)    
Predicted Functional Partners:
RSAG_01400
Uncharacterized protein (752 aa)
 
  0.982
RSAG_01355
Uncharacterized protein (1517 aa)
   
 
  0.971
ldh
L-lactate dehydrogenase (316 aa)
   
  0.968
RSAG_00558
Uncharacterized protein (514 aa)
 
  0.951
RSAG_00557
Succinate dehydrogenase and fumarate reductase iron-sulfur protein (233 aa)
   
  0.950
RSAG_00043
Uncharacterized protein (537 aa)
   
  0.944
RSAG_00212
Pyruvate-flavodoxin oxidoreductase ; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin (1178 aa)
     
 
  0.936
RSAG_01513
Adenylylsulfate reductase, alpha subunit (581 aa)
   
  0.918
RSAG_00378
Glutamate dehydrogenase (444 aa)
     
 
  0.891
RSAG_00775
Acetyl-CoA carboxylase, carboxyl transferase, alpha subunit (571 aa)
   
 
  0.885
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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