STRINGSTRING
RSAG_00094 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00094" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00094Uncharacterized protein (623 aa)    
Predicted Functional Partners:
RSAG_00095
Radical SAM-linked protein (246 aa)
          0.997
RSAG_00096
Rne/Rng family ribonuclease (398 aa)
       
    0.963
RSAG_00625
Uncharacterized protein (460 aa)
 
          0.611
pnp
Polynucleotide phosphorylase ; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (697 aa)
     
 
    0.590
RSAG_00137
Cell shape protein MreC ; Involved in formation and maintenance of cell shape (281 aa)
 
        0.571
RSAG_02142
MreB/Mrl family cell shape determining protein (329 aa)
 
        0.513
RSAG_02432
23S rRNA (Uracil-5-)-methyltransferase RumA (454 aa)
   
 
    0.495
RSAG_01824
23S rRNA (Uracil-5-)-methyltransferase RumA (545 aa)
   
 
    0.495
RSAG_00730
23S rRNA (Uracil-5-)-methyltransferase RumA (386 aa)
   
 
    0.495
RSAG_02370
UDP-N-acetylmuramyl-tripeptide synthetase (491 aa)
   
        0.476
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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