STRINGSTRING
RSAG_00101 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00101" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00101Uncharacterized protein (98 aa)    
Predicted Functional Partners:
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (211 aa)
              0.854
obg
GTP-binding protein Obg ; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control (434 aa)
         
  0.749
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (104 aa)
   
      0.705
RSAG_00098
Uncharacterized protein (106 aa)
 
          0.680
rpmA
50S ribosomal protein L27 (95 aa)
   
        0.652
RSAG_04661
UPF0348 protein RSAG_04661 (419 aa)
 
          0.542
RSAG_04685
Uncharacterized protein (576 aa)
 
        0.527
RSAG_03164
Uncharacterized protein (560 aa)
 
        0.523
RSAG_02468
Uncharacterized protein (270 aa)
 
          0.517
RSAG_01291
Uncharacterized protein (187 aa)
 
          0.510
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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