STRINGSTRING
RSAG_00109 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00109" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00109Uncharacterized protein (250 aa)    
Predicted Functional Partners:
sepF
Cell division protein SepF ; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA (219 aa)
 
     
  0.910
RSAG_00112
Pseudouridine synthase ; Responsible for synthesis of pseudouridine from uracil (304 aa)
              0.860
lspA
Signal peptidase II ; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (174 aa)
              0.806
aroB
3-dehydroquinate synthase (363 aa)
              0.806
RSAG_00107
No annotation available (35 aa)
              0.796
RSAG_00113
Uncharacterized protein (215 aa)
              0.615
mrnC
Mini-RNase III ; Involved in correct processing of both the 5’ and 3’ ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors (159 aa)
   
          0.564
RSAG_00627
Laccase domain protein (283 aa)
   
   
  0.526
prmA
Ribosomal protein L11 methyltransferase ; Methylates ribosomal protein L11 (317 aa)
 
          0.511
RSAG_04720
YggS family pyridoxal phosphate enzyme (192 aa)
         
  0.497
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
Server load: low (12%) [HD]