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RSAG_00118 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00118" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00118Uncharacterized protein (323 aa)    
Predicted Functional Partners:
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa)
 
   
  0.771
RSAG_00715
DNA topoisomerase (734 aa)
   
   
  0.699
RSAG_00260
Uncharacterized protein (393 aa)
   
   
  0.545
RSAG_01861
DNA protecting protein DprA (305 aa)
 
          0.531
RSAG_03494
Uncharacterized protein (285 aa)
 
          0.527
RSAG_00628
UPF0102 protein RSAG_00628 (121 aa)
 
          0.521
RSAG_02671
Uncharacterized protein (279 aa)
   
          0.521
RSAG_00929
Uncharacterized protein (327 aa)
   
          0.520
RSAG_01862
Mg chelatase-like protein (510 aa)
 
          0.519
truB
tRNA-uridine isomerase ; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (295 aa)
   
        0.512
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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