STRINGSTRING
RSAG_00121 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00121" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00121Uncharacterized protein (226 aa)    
Predicted Functional Partners:
RSAG_00122
Uncharacterized protein (165 aa)
              0.859
RSAG_00123
Uncharacterized protein (214 aa)
              0.805
topA
DNA topoisomerase I ; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] (689 aa)
 
   
  0.745
RSAG_00715
DNA topoisomerase (734 aa)
   
   
  0.699
RSAG_00535
Excisionase family DNA binding domain-containing protein (77 aa)
 
          0.676
RSAG_00584
Uncharacterized protein (146 aa)
   
          0.631
RSAG_00550
Uncharacterized protein (69 aa)
   
          0.607
RSAG_00260
Uncharacterized protein (393 aa)
   
   
  0.545
nadD
Nicotinate mononucleotide adenylyltransferase ; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) (211 aa)
   
   
    0.529
RSAG_00441
Uncharacterized protein ; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules (317 aa)
 
 
 
  0.526
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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