STRINGSTRING
RSAG_00137 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00137" - Cell shape protein MreC in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00137Cell shape protein MreC ; Involved in formation and maintenance of cell shape (281 aa)    
Predicted Functional Partners:
RSAG_00138
MreB/Mrl family cell shape determining protein (337 aa)
 
 
  0.986
RSAG_02142
MreB/Mrl family cell shape determining protein (329 aa)
 
 
  0.984
RSAG_00135
Beta-lactamase (964 aa)
 
   
  0.952
RSAG_00132
Uncharacterized protein (386 aa)
 
 
  0.938
RSAG_00136
Rod shape-determining protein MreD (176 aa)
 
          0.899
RSAG_00134
Site-determining protein (262 aa)
         
  0.851
RSAG_02391
Uncharacterized protein (365 aa)
 
 
  0.756
RSAG_00783
Cell division protein FtsW (398 aa)
 
 
  0.755
RSAG_00139
DNA repair protein RadC (239 aa)
              0.727
RSAG_02388
Uncharacterized protein (578 aa)
   
   
  0.648
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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