STRINGSTRING
RSAG_00148 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00148" - Uncharacterized protein in Ruminococcus sp. 5139BFAA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00148Uncharacterized protein (428 aa)    
Predicted Functional Partners:
RSAG_01783
Uncharacterized protein (642 aa)
   
 
    0.776
RSAG_03034
Uncharacterized protein (628 aa)
       
    0.734
RSAG_02897
Uncharacterized protein (671 aa)
       
  0.655
RSAG_00150
Uncharacterized protein (223 aa)
              0.530
RSAG_00149
IS605 OrfB family transposase (384 aa)
              0.530
RSAG_03496
Uncharacterized protein (134 aa)
       
    0.504
RSAG_03468
HAD hydrolase, family IA (218 aa)
   
   
    0.445
RSAG_02727
Uncharacterized protein (397 aa)
   
          0.437
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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