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RSAG_00157 protein (Ruminococcus sp. 5139BFAA) - STRING interaction network
"RSAG_00157" - rRNA in Ruminococcus sp. 5139BFAA
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSAG_00157rRNA (cytosine-N(4)-)-methyltransferase RsmH ; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA (351 aa)    
Predicted Functional Partners:
RSAG_00158
Heavy metal translocating P-type ATPase (884 aa)
   
        0.801
mraZ
Transcriptional regulator MraZ (146 aa)
 
   
  0.728
RSAG_01228
DNA polymerase I (849 aa)
 
   
  0.597
RSAG_00590
Uncharacterized protein (699 aa)
 
   
  0.589
RSAG_02877
Uncharacterized protein (444 aa)
   
   
  0.579
RSAG_02370
UDP-N-acetylmuramyl-tripeptide synthetase (491 aa)
   
   
  0.579
RSAG_02386
Uncharacterized protein (170 aa)
 
          0.529
RSAG_00159
Uncharacterized protein (105 aa)
              0.528
RSAG_03232
Prolipoprotein diacylglyceryl transferase ; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (260 aa)
 
          0.523
RSAG_02391
Uncharacterized protein (365 aa)
   
   
  0.510
Your Current Organism:
Ruminococcus sp. 5139BFAA
NCBI taxonomy Id: 457412
Other names: R. sp. 5_1_39BFAA, Ruminococcus 5_1_39BFAA, Ruminococcus sp. 5139BFAA, Ruminococcus sp. 5_1_39BFAA
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